The MDD is a different machine on every level possible. It shares pretty much zero characteristics with any previous G4 line. Aside from the fact that it uses a G4 as its CPU, it's as alien to rest of the Power Mac G4 family as the Power Mac G5s are.
The Digital Audio and QuickSilver were nearly identical aside from external appearances. But there's one little hitch you'll snag upon trying to put a QS board into your DA; The QS has an additional 4-pin power connection coming from the PSU, which your machine's PSU doesn't have.
So, in short, putting in a QS board means putting in a QS PSU as well.