I am having the same problem. but only sporadically. The strange thing is that when this behavior occurs, not being able to click into a dialogue box, I also lose my modifier keys. For example, Control + I on icon in Finder will not bring up contextual menu as it normally does. None of the modifier keys will work. I have no idea how to recreate the problem. I should mention that I am using Logitech cordless keyboard, but have done so for months without problem. (Yes, batteries are new; connection to computer is verified.) This behavior started after installing Apples 10.3.1 and Bluetooth update (but as yet have no devices enabled in the Pref Pane.